STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106908905Uncharacterized protein. (259 aa)    
Predicted Functional Partners:
myl1
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.839
ENSPMEP00000032324
PDZ domain-containing protein.
 
      0.830
myl3
Myosin, light chain 13.
   
 0.690
ENSPMEP00000022416
Uncharacterized protein.
   
 0.690
ENSPMEP00000014722
Uncharacterized protein.
   
 0.689
LOC106924391
Uncharacterized protein.
   
 0.681
LOC106920830
Uncharacterized protein.
   
 0.681
ENSPMEP00000011821
Uncharacterized protein.
   
 0.681
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
 0.679
LOC106925968
Myosin light chain, phosphorylatable, fast skeletal muscle b.
   
 0.679
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.