STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106908890Uncharacterized protein. (294 aa)    
Predicted Functional Partners:
LOC106921900
Vang-like protein.
    
 0.650
LOC106933407
Vang-like protein.
    
 0.649
vangl2
VANGL planar cell polarity protein 2.
    
 0.649
VANGL1
Vang-like protein.
    
 0.649
dvl1
Dishevelled segment polarity protein 1a.
    
 0.636
dvl2
Dishevelled segment polarity protein 2.
    
 0.636
LOC106934101
Dishevelled segment polarity protein 3a.
    
 0.636
dvl3
Uncharacterized protein.
    
 0.636
ENSPMEP00000023359
DIX domain-containing protein.
    
 0.636
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.617
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.