STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106913664Fibrinogen C-terminal domain-containing protein. (135 aa)    
Predicted Functional Partners:
fbln5
Fibulin 5.
   
 0.614
LOC106916555
Microfibril associated protein 5.
   
 
 0.547
mst1r
Macrophage stimulating 1 receptor b.
   
 
  0.539
met
MET proto-oncogene, receptor tyrosine kinase.
   
 
  0.539
LOC106916334
Macrophage stimulating 1 receptor a.
   
 
  0.539
itgb8
Integrin beta; Belongs to the integrin beta chain family.
    
  0.515
MFAP2
Microfibril associated protein 2.
   
 
 0.511
kansl2
KAT8 regulatory NSL complex subunit 2.
    
  0.510
angptl4
Angiopoietin-like 4.
  
  
 
0.486
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
   
 0.485
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.