STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106908250Oxysterol-binding protein; Belongs to the OSBP family. (861 aa)    
Predicted Functional Partners:
npc1
Niemann-Pick disease, type C1.
   
 0.764
NPC1L1
NPC1 like intracellular cholesterol transporter 1.
   
 0.761
gale
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.696
uxs1
UDP-glucuronate decarboxylase 1.
     
 0.656
katnal2
Katanin p60 subunit A-like 2.
   
 
 0.648
scap
SREBF chaperone.
   
 0.578
uaca
Uveal autoantigen with coiled-coil domains and ankyrin repeats b.
    
  0.549
ENSPMEP00000030074
ADP-ribosylation factor-like 15a.
   
 0.544
LOC106925217
Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.
    
 0.540
ripk4
Receptor-interacting serine-threonine kinase 4.
    
 0.540
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.