STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rimklaRibosomal modification protein rimK-like family member A. (420 aa)    
Predicted Functional Partners:
idh3b
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
    
 0.949
cs
Citrate synthase; Belongs to the citrate synthase family.
    
 0.948
ogdh
Oxoglutarate (alpha-ketoglutarate) dehydrogenase b (lipoamide).
   
 0.939
OGDH
Oxoglutarate dehydrogenase.
   
 0.939
nat8l
N-acetyltransferase 8-like.
     
 0.935
idh1
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
    
 0.935
idh2
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
    
 0.935
LOC106918818
N-acetylaspartate synthetase-like.
     
 0.935
LOC106913728
Malate dehydrogenase.
    
 0.934
mdh1
Malate dehydrogenase.
    
 0.934
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.