STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
snphSyntaphilin b. (745 aa)    
Predicted Functional Partners:
LOC106931596
Uncharacterized protein.
 
   
  0.483
LOC106923396
RAD21 cohesin complex component a.
 
   
  0.483
ENSPMEP00000020728
Rad21_Rec8_N domain-containing protein.
 
   
  0.483
ENSPMEP00000020735
annotation not available
 
   
  0.483
cplx4
Complexin 4a.
      
 0.451
ntan1
Uncharacterized protein.
      
 0.447
TMEM82
Transmembrane protein 82.
      
 0.422
ENSPMEP00000005440
Transmembrane protein 82.
      
 0.422
LOC106927486
Trafficking protein, kinesin binding 2.
      
 0.414
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.