STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106927595LIM zinc-binding domain-containing protein. (76 aa)    
Predicted Functional Partners:
LOC106904805
Serine/threonine kinase 3 (STE20 homolog, yeast).
    
 0.971
LOC106931957
Uncharacterized protein.
    
 0.971
sav1
Salvador family WW domain containing protein 1.
    
 
 0.720
fbxw11
F-box and WD repeat domain containing 11b.
    
 0.674
ppp1cb
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
  0.560
ppp1cc
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
  0.560
LOC106924700
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
  0.560
LOC106907457
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
  0.560
LOC106931920
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
  0.560
LOC106932448
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
  0.560
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.