STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnpepl1Arginyl aminopeptidase like 1. (714 aa)    
Predicted Functional Partners:
LOC106928659
Phosphodiesterase.
     
 0.803
lta4h
Leukotriene A(4) hydrolase; Belongs to the peptidase M1 family.
  
  
 
0.689
rpl36
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
    
  0.659
LOC106916860
Carnosine dipeptidase 2.
  
 0.658
LOC106917457
Zgc:114181.
  
 0.658
CNDP2
Carnosine dipeptidase 2.
  
 0.658
rpl23a
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
 0.655
rps27a
Ribosomal protein S27a.
    
  0.644
txnrd2
Thioredoxin reductase 2, tandem duplicate 1.
  
 0.643
dld
Dihydrolipoyl dehydrogenase.
  
 0.643
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.