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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppt2Palmitoyl-protein thioesterase 2. (301 aa)    
Predicted Functional Partners:
ppt1
Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile).
     
0.963
mecr
Mitochondrial trans-2-enoyl-CoA reductase.
    
 0.961
LOC106920425
Zgc:66024.
  
  
 
0.960
acsl4
Acyl-CoA synthetase long chain family member 4a.
    
 0.913
LOC106931456
Acyl-CoA synthetase long chain family member 3b.
    
 0.913
acsl3
Uncharacterized protein.
    
 0.913
LOC106920965
AMP-binding domain-containing protein.
    
 0.911
LOC106914978
Acyl-CoA synthetase long chain family member 2.
    
 0.911
LOC106922682
AMP-binding domain-containing protein.
    
 0.911
acsl1
Acyl-CoA synthetase long chain family member 1a.
    
 0.911
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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