exoc5 protein (Poecilia mexicana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

exoc5

Exocyst complex component 5. (707 aa)

Predicted Functional Partners:

exoc2

0.999

exoc7

0.999

exoc4

0.999

exoc8

0.999

exoc1

0.999

exoc3

0.987

LOC106904997

0.987

LOC106923239

0.986

exoc6

0.986

ENSPMEP00000016204

0.973

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPMEP00000016204	LOC106904997	ENSPMEP00000016204	ENSPMEP00000027822	Si:dkey-245p14.4.	Exocyst complex component 3-like 1.	0.867
ENSPMEP00000016204	LOC106923239	ENSPMEP00000016204	ENSPMEP00000017726	Si:dkey-245p14.4.	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.962
ENSPMEP00000016204	exoc2	ENSPMEP00000016204	ENSPMEP00000002140	Si:dkey-245p14.4.	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	0.982
ENSPMEP00000016204	exoc3	ENSPMEP00000016204	ENSPMEP00000001301	Si:dkey-245p14.4.	Exocyst complex component 3.	0.867
ENSPMEP00000016204	exoc4	ENSPMEP00000016204	ENSPMEP00000020714	Si:dkey-245p14.4.	Exocyst complex component 4.	0.980
ENSPMEP00000016204	exoc5	ENSPMEP00000016204	ENSPMEP00000004136	Si:dkey-245p14.4.	Exocyst complex component 5.	0.973
ENSPMEP00000016204	exoc6	ENSPMEP00000016204	ENSPMEP00000025860	Si:dkey-245p14.4.	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.962
ENSPMEP00000016204	exoc7	ENSPMEP00000016204	ENSPMEP00000013971	Si:dkey-245p14.4.	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.978
ENSPMEP00000016204	exoc8	ENSPMEP00000016204	ENSPMEP00000031962	Si:dkey-245p14.4.	Exocyst complex component 8.	0.978
LOC106904997	ENSPMEP00000016204	ENSPMEP00000027822	ENSPMEP00000016204	Exocyst complex component 3-like 1.	Si:dkey-245p14.4.	0.867
LOC106904997	LOC106923239	ENSPMEP00000027822	ENSPMEP00000017726	Exocyst complex component 3-like 1.	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.972
LOC106904997	exoc1	ENSPMEP00000027822	ENSPMEP00000032970	Exocyst complex component 3-like 1.	Exocyst complex component 1.	0.986
LOC106904997	exoc2	ENSPMEP00000027822	ENSPMEP00000002140	Exocyst complex component 3-like 1.	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	0.986
LOC106904997	exoc4	ENSPMEP00000027822	ENSPMEP00000020714	Exocyst complex component 3-like 1.	Exocyst complex component 4.	0.986
LOC106904997	exoc5	ENSPMEP00000027822	ENSPMEP00000004136	Exocyst complex component 3-like 1.	Exocyst complex component 5.	0.987
LOC106904997	exoc6	ENSPMEP00000027822	ENSPMEP00000025860	Exocyst complex component 3-like 1.	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.972
LOC106904997	exoc7	ENSPMEP00000027822	ENSPMEP00000013971	Exocyst complex component 3-like 1.	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.973
LOC106904997	exoc8	ENSPMEP00000027822	ENSPMEP00000031962	Exocyst complex component 3-like 1.	Exocyst complex component 8.	0.974
LOC106923239	ENSPMEP00000016204	ENSPMEP00000017726	ENSPMEP00000016204	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Si:dkey-245p14.4.	0.962
LOC106923239	LOC106904997	ENSPMEP00000017726	ENSPMEP00000027822	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 3-like 1.	0.972