STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106917814Asp-B-Hydro_N domain-containing protein. (289 aa)    
Predicted Functional Partners:
LOC106921901
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
    
 0.934
LOC106930357
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
    
 0.934
LOC106926978
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
    
 0.820
LOC106916918
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
    
 0.817
LOC106921753
Ryanodine receptor 1a (skeletal).
   
 
 0.800
LOC106914059
Ryanodine receptor 2b (cardiac).
   
 
 0.800
ENSPMEP00000006064
B30.2/SPRY domain-containing protein.
   
 
 0.658
ENSPMEP00000007642
B30.2/SPRY domain-containing protein.
   
 
 0.658
ENSPMEP00000024896
Ins145_P3_rec domain-containing protein.
   
 
 0.658
ENSPMEP00000028239
B30.2/SPRY domain-containing protein.
   
 
 0.658
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.