STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbfbCore-binding factor subunit beta. (188 aa)    
Predicted Functional Partners:
LOC106918207
Runt-related transcription factor.
    
 0.926
LOC106927107
Runt-related transcription factor.
    
 0.924
ENSPMEP00000003502
RunxI domain-containing protein.
    
 0.924
LOC106911578
Runt domain-containing protein.
    
 0.924
aicda
Activation-induced cytidine deaminase.
    
 
 0.896
LOC106904665
Runt domain-containing protein.
    
 0.886
cul5
Cullin 5; Belongs to the cullin family.
    
 
 0.877
CUL5
Cullin 5; Belongs to the cullin family.
    
 
 0.877
LOC106929611
Elongin B.
    
 
 0.828
ELOB
Elongin B.
    
 
 0.828
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.