STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF423Si:ch211-216l23.1. (1340 aa)    
Predicted Functional Partners:
ENSPMEP00000029329
Uncharacterized protein.
 
      0.892
HDAC3
Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
    
 0.668
ENSPMEP00000012258
Uncharacterized protein.
    
  0.584
ENSPMEP00000028971
Uncharacterized protein.
    
  0.584
LOC106911431
Uncharacterized protein.
    
  0.542
ENSPMEP00000010585
BRCT domain-containing protein.
    
  0.542
YTHDC2
YTH domain containing 2.
    
  0.524
rps13
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 0.505
ENSPMEP00000014332
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
  0.503
sgk3
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.475
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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