STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106906000Rap guanine nucleotide exchange factor (GEF) 5a. (647 aa)    
Predicted Functional Partners:
LOC106916117
Uncharacterized protein.
    
 0.879
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.879
mras
Muscle RAS oncogene homolog.
    
 0.791
LOC106916736
RAP1A, member of RAS oncogene family a.
    
 0.651
LOC106903419
Uncharacterized protein.
    
 0.651
rap1b
Uncharacterized protein.
    
 0.651
LOC106911171
RAS related.
    
 0.625
LOC106912093
RAS related 2.
    
 0.625
ENSPMEP00000023289
Uncharacterized protein.
    
 0.625
RRAS2
Ras-related protein R-Ras2.
    
 0.625
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.