Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| NCBP1 | UPF2 | ENSPMEP00000032117 | ENSPMEP00000030490 | Nuclear cap binding protein subunit 1. | UPF2 regulator of nonsense mediated mRNA decay. | 0.804 |
| NCBP1 | lix1l | ENSPMEP00000032117 | ENSPMEP00000012270 | Nuclear cap binding protein subunit 1. | Splicing factor 3b, subunit 4. | 0.818 |
| NCBP1 | ncbp2 | ENSPMEP00000032117 | ENSPMEP00000015788 | Nuclear cap binding protein subunit 1. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] | 0.999 |
| NCBP1 | rps6 | ENSPMEP00000032117 | ENSPMEP00000016764 | Nuclear cap binding protein subunit 1. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.641 |
| NCBP1 | sf3b1 | ENSPMEP00000032117 | ENSPMEP00000018068 | Nuclear cap binding protein subunit 1. | Splicing factor 3b, subunit 1. | 0.938 |
| NCBP1 | sf3b2 | ENSPMEP00000032117 | ENSPMEP00000028231 | Nuclear cap binding protein subunit 1. | Splicing factor 3b, subunit 2. | 0.934 |
| NCBP1 | sltm | ENSPMEP00000032117 | ENSPMEP00000004765 | Nuclear cap binding protein subunit 1. | SAFB-like, transcription modulator. | 0.687 |
| NCBP1 | snrpe | ENSPMEP00000032117 | ENSPMEP00000021559 | Nuclear cap binding protein subunit 1. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.989 |
| NCBP1 | srsf2 | ENSPMEP00000032117 | ENSPMEP00000007116 | Nuclear cap binding protein subunit 1. | Serine and arginine rich splicing factor 2a. | 0.814 |
| UPF2 | NCBP1 | ENSPMEP00000030490 | ENSPMEP00000032117 | UPF2 regulator of nonsense mediated mRNA decay. | Nuclear cap binding protein subunit 1. | 0.804 |
| UPF2 | ncbp2 | ENSPMEP00000030490 | ENSPMEP00000015788 | UPF2 regulator of nonsense mediated mRNA decay. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] | 0.798 |
| UPF2 | rps6 | ENSPMEP00000030490 | ENSPMEP00000016764 | UPF2 regulator of nonsense mediated mRNA decay. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.592 |
| UPF2 | sltm | ENSPMEP00000030490 | ENSPMEP00000004765 | UPF2 regulator of nonsense mediated mRNA decay. | SAFB-like, transcription modulator. | 0.710 |
| UPF2 | srsf2 | ENSPMEP00000030490 | ENSPMEP00000007116 | UPF2 regulator of nonsense mediated mRNA decay. | Serine and arginine rich splicing factor 2a. | 0.661 |
| fau | ncbp2 | ENSPMEP00000030493 | ENSPMEP00000015788 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] | 0.415 |
| fau | rps6 | ENSPMEP00000030493 | ENSPMEP00000016764 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.999 |
| fau | sltm | ENSPMEP00000030493 | ENSPMEP00000004765 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | SAFB-like, transcription modulator. | 0.777 |
| fau | snrpe | ENSPMEP00000030493 | ENSPMEP00000021559 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.474 |
| lix1l | NCBP1 | ENSPMEP00000012270 | ENSPMEP00000032117 | Splicing factor 3b, subunit 4. | Nuclear cap binding protein subunit 1. | 0.818 |
| lix1l | ncbp2 | ENSPMEP00000012270 | ENSPMEP00000015788 | Splicing factor 3b, subunit 4. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] | 0.963 |
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