STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106929275Uncharacterized protein. (975 aa)    
Predicted Functional Partners:
ENSPMEP00000008141
Uncharacterized protein.
    
0.963
nrcam
Neuronal cell adhesion molecule a.
    
0.957
nfasc
Neurofascin homolog (chicken) a.
  
 
0.955
cntnap1
Contactin associated protein 1.
   
 0.954
NRCAM
Neuronal cell adhesion molecule.
    
0.946
cntn1
Contactin 1b.
  
  
 
0.921
LOC106925021
Uncharacterized protein.
    
0.700
LOC106920837
L1 cell adhesion molecule, paralog a.
    
0.700
chl1
Cell adhesion molecule L1-like b.
    
0.700
LOC106920320
Uncharacterized protein.
    
0.700
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.