STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106908166Uncharacterized protein. (157 aa)    
Predicted Functional Partners:
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.648
LOC106912402
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.648
LOC106927107
Runt-related transcription factor.
    
  0.520
ENSPMEP00000003502
RunxI domain-containing protein.
    
  0.520
LOC106918207
Runt-related transcription factor.
    
  0.520
LOC106911578
Runt domain-containing protein.
    
  0.520
LOC106904665
Runt domain-containing protein.
    
  0.520
cirbp
Cold inducible RNA binding protein b.
  
 
  0.485
tial1
TIA1 cytotoxic granule-associated RNA binding protein-like 1.
  
   0.476
ENSPMEP00000009717
RRM domain-containing protein.
  
   
 0.436
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.