STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106908167Uncharacterized protein. (1196 aa)    
Predicted Functional Partners:
LOC106903858
Uncharacterized protein.
   
  0.713
LOC106913124
Uncharacterized protein.
   
  0.713
LOC106905344
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
   
  0.713
LOC106926452
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
  0.709
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
  0.709
capzb
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.701
ctnna1
Catenin (cadherin-associated protein), alpha 1.
   
 0.564
LOC106915155
Vinculin a.
   
 0.564
LOC106908186
Uncharacterized protein.
   
 0.564
ctnnal1
Catenin (cadherin-associated protein), alpha-like 1.
   
 0.564
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.