STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000004982NACHT domain-containing protein. (557 aa)    
Predicted Functional Partners:
ripk2
Receptor-interacting serine-threonine kinase 2.
   
 0.620
nek7
NIMA-related kinase 7; Belongs to the protein kinase superfamily.
    
 0.610
pycard
Uncharacterized protein.
   
 0.602
LOC106920434
PYD and CARD domain containing.
   
 0.602
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
 0.573
rfx5
Regulatory factor X, 5.
    
 0.567
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
    
  0.566
rfxank
Regulatory factor X-associated ankyrin-containing protein.
    
 0.538
LOC106907688
Interleukin-1.
   
 0.536
bcl2
BCL2 apoptosis regulator b.
   
 0.525
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.