STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106920434PYD and CARD domain containing. (215 aa)    
Predicted Functional Partners:
LOC106926427
Caspase 10, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
   
 0.942
LOC106917742
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.932
ENSPMEP00000007191
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.932
LOC106920431
Uncharacterized protein; Belongs to the peptidase C14A family.
   
0.932
ENSPMEP00000025656
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.932
ENSPMEP00000031167
Uncharacterized protein.
   
 0.927
ENSPMEP00000012682
Uncharacterized protein.
    
 0.894
ENSPMEP00000020661
Uncharacterized protein.
    
 0.856
ENSPMEP00000032000
Uncharacterized protein.
    
 0.856
ENSPMEP00000029875
Uncharacterized protein.
   
 0.841
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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