STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106926969Spalt-like transcription factor 2. (1252 aa)    
Predicted Functional Partners:
wdr73
WD repeat domain 73.
    
  0.673
ENSPMEP00000023180
CAF1C_H4-bd domain-containing protein.
    
  0.673
LOC106913905
Retinoblastoma binding protein 4.
    
  0.673
bsx
Brain-specific homeobox.
   
 0.627
mta2
Metastasis associated 1 family, member 2.
    
  0.614
mta3
Metastasis associated 1 family, member 3.
    
  0.614
mta1
Metastasis associated 1.
    
  0.614
gatad2a
GATA zinc finger domain containing 2Ab.
    
  0.600
LOC106910045
GATA zinc finger domain containing 2B.
    
  0.600
LOC106908852
GATA zinc finger domain containing 2Ab.
    
  0.600
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.