STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106930199Uncharacterized protein. (2039 aa)    
Predicted Functional Partners:
LOC106920112
Zgc:172302.
  
  
 
0.891
LOC106904934
ATP-binding cassette, sub-family A (ABC1), member 1A.
  
  
 
0.890
nr1h3
Nuclear receptor subfamily 1, group H, member 3.
    
 0.733
ENSPMEP00000003233
Uncharacterized protein.
 
   
  0.706
LOC106904219
Cytochrome c oxidase assembly homolog 15 (yeast).
    
 0.673
LOC106908508
Uncharacterized protein.
    
 0.665
LOC106908507
Uncharacterized protein.
    
 0.665
abca3
ATP-binding cassette, sub-family A (ABC1), member 3b.
  
 
0.649
ENSPMEP00000003213
ABC transporter domain-containing protein.
  
  
 
0.641
igbp1
Immunoglobulin (CD79A) binding protein 1.
    
 0.625
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.