STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000005259Uncharacterized protein. (159 aa)    
Predicted Functional Partners:
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.661
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.649
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.640
ift172
Intraflagellar transport 172.
    
 0.637
LOC106903858
Uncharacterized protein.
    
  0.636
LOC106913124
Uncharacterized protein.
    
  0.636
LOC106905344
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
  0.636
prkcz
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.592
prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.592
ift88
Intraflagellar transport 88 homolog.
    
 0.590
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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