bag1 protein (Poecilia mexicana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

bag1

BCL2 associated athanogene 1. (207 aa)

Predicted Functional Partners:

psmd12

0.985

psmc4

0.978

psmc3

0.974

psmd7

0.974

psmc2

0.974

psmc5

0.973

psmd6

0.973

psmd13

0.971

psmc1

0.971

hspbp1

0.970

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
bag1	hspbp1	ENSPMEP00000005347	ENSPMEP00000016722	BCL2 associated athanogene 1.	HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1.	0.970
bag1	psmc1	ENSPMEP00000005347	ENSPMEP00000033798	BCL2 associated athanogene 1.	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	0.971
bag1	psmc2	ENSPMEP00000005347	ENSPMEP00000024045	BCL2 associated athanogene 1.	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	0.974
bag1	psmc3	ENSPMEP00000005347	ENSPMEP00000010173	BCL2 associated athanogene 1.	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	0.974
bag1	psmc4	ENSPMEP00000005347	ENSPMEP00000019836	BCL2 associated athanogene 1.	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	0.978
bag1	psmc5	ENSPMEP00000005347	ENSPMEP00000007073	BCL2 associated athanogene 1.	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.	0.973
bag1	psmd12	ENSPMEP00000005347	ENSPMEP00000030666	BCL2 associated athanogene 1.	Proteasome 26S subunit, non-ATPase 12.	0.985
bag1	psmd13	ENSPMEP00000005347	ENSPMEP00000018517	BCL2 associated athanogene 1.	Proteasome 26S subunit, non-ATPase 13.	0.971
bag1	psmd6	ENSPMEP00000005347	ENSPMEP00000034377	BCL2 associated athanogene 1.	Proteasome 26S subunit, non-ATPase 6.	0.973
bag1	psmd7	ENSPMEP00000005347	ENSPMEP00000017999	BCL2 associated athanogene 1.	Proteasome 26S subunit, non-ATPase 7.	0.974
hspbp1	bag1	ENSPMEP00000016722	ENSPMEP00000005347	HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1.	BCL2 associated athanogene 1.	0.970
psmc1	bag1	ENSPMEP00000033798	ENSPMEP00000005347	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	BCL2 associated athanogene 1.	0.971
psmc1	psmc2	ENSPMEP00000033798	ENSPMEP00000024045	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	0.999
psmc1	psmc3	ENSPMEP00000033798	ENSPMEP00000010173	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	0.999
psmc1	psmc4	ENSPMEP00000033798	ENSPMEP00000019836	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	0.999
psmc1	psmc5	ENSPMEP00000033798	ENSPMEP00000007073	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.	0.999
psmc1	psmd12	ENSPMEP00000033798	ENSPMEP00000030666	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	Proteasome 26S subunit, non-ATPase 12.	0.999
psmc1	psmd13	ENSPMEP00000033798	ENSPMEP00000018517	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	Proteasome 26S subunit, non-ATPase 13.	0.999
psmc1	psmd6	ENSPMEP00000033798	ENSPMEP00000034377	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	Proteasome 26S subunit, non-ATPase 6.	0.999
psmc1	psmd7	ENSPMEP00000033798	ENSPMEP00000017999	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	Proteasome 26S subunit, non-ATPase 7.	0.999