STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000005616Uncharacterized protein. (130 aa)    
Predicted Functional Partners:
mst1r
Macrophage stimulating 1 receptor b.
   
 
  0.539
met
MET proto-oncogene, receptor tyrosine kinase.
   
 
  0.539
LOC106916334
Macrophage stimulating 1 receptor a.
   
 
  0.539
itgb8
Integrin beta; Belongs to the integrin beta chain family.
    
  0.515
kansl2
KAT8 regulatory NSL complex subunit 2.
    
  0.510
mcrs1
Microspherule protein 1.
    
 0.477
tex30
Testis expressed 30.
    
  0.450
kansl3
KAT8 regulatory NSL complex subunit 3.
    
  0.450
ENSPMEP00000010941
Uncharacterized protein.
    
  0.426
phf20
PHD finger protein 20, a.
    
  0.426
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.