Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000005658Si:dkey-16i5.8. (187 aa)    
Predicted Functional Partners:
ENSPMEP00000015565
NDK domain-containing protein.
    
   0.617
wdr90
WD repeat domain 90.
    
   0.542
rpl10
Ribosomal protein L10.
      
 0.519
synj2bp
Synaptojanin 2 binding protein.
    
 0.503
smim4
Small integral membrane protein 4.
      
 0.500
ldah
Lipid droplet associated hydrolase.
      
 0.486
LOC106916162
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.483
LOC106904345
LIM domain binding 1a.
    
 0.466
LOC106933726
LIM domain binding 2a.
    
 0.466
tmem97
Transmembrane protein 97; Intracellular orphan receptor that binds numerous drugs and which is highly expressed in various proliferating cells. Corresponds to the sigma-2 receptor, which is thought to play important role in regulating cell survival, morphology and differentiation. May play a role as a regulator of cellular cholesterol homeostasis. May function as sterol isomerase. May alter the activity of some cytochrome P450 proteins.
    
 
 0.466
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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