STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106923674Elastin microfibril interfacer 2a. (1111 aa)    
Predicted Functional Partners:
itpk1
Inositol-tetrakisphosphate 1-kinase b.
    
  0.595
LOC106924529
Mucolipin 3a.
      
 0.580
rad18
RAD18 E3 ubiquitin protein ligase.
      
 0.577
OGDH
Oxoglutarate dehydrogenase.
      
 0.523
ENSPMEP00000014077
Uncharacterized protein.
    
  0.504
LOC106926641
Complement C1q C chain.
   
  0.496
rai1
Retinoic acid induced 1.
  
 
  0.477
LOC106913299
Tyrosine-protein kinase.
    
 0.472
ENSPMEP00000005866
FCH domain-containing protein.
    
 0.472
fes
Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. Fes/fps subfamily.
    
 0.472
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.