STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106917047GRAM domain-containing protein. (428 aa)    
Predicted Functional Partners:
gramd1c
GRAM domain containing 1c.
    
 
0.622
LOC106922468
Sodium channel, voltage-gated, type II, beta.
    
 0.612
LOC106933177
Ig-like domain-containing protein.
    
 0.597
LOC106914155
Ig-like domain-containing protein.
    
 0.597
LOC106919087
Sodium channel, voltage-gated, type IV, beta b.
    
 0.577
LOC106922467
Sodium channel, voltage-gated, type IV, beta a.
    
 0.577
LOC106904294
Paraoxonase 1.
      
 0.522
gramd1b
GRAM domain containing 1Bb.
    
  
0.521
ENSPMEP00000023933
Uncharacterized protein.
    
   0.521
adgrd1
Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family.
   
 
  0.506
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.