STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106909730Uncharacterized protein. (578 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2.
    
 0.800
alox5ap
Arachidonate 5-lipoxygenase-activating protein.
   
 0.793
lta4h
Leukotriene A(4) hydrolase; Belongs to the peptidase M1 family.
     
 0.781
ptgs2
Prostaglandin-endoperoxide synthase 2b.
   
 
 0.749
ENSPMEP00000010683
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
    
 0.732
gpx8
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
    
 0.732
LOC106926376
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
    
 0.729
LOC106923731
Prostaglandin-endoperoxide synthase 1.
   
 
 0.725
ptgs1
Prostaglandin-endoperoxide synthase 1.
   
 
 0.725
LOC106924946
Cytochrome P450, family 4, subfamily F, polypeptide 3; Belongs to the cytochrome P450 family.
   
 0.719
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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