STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POU3F4POU domain protein. (363 aa)    
Predicted Functional Partners:
snapc4
Uncharacterized protein.
    
  0.666
timm8a
Translocase of inner mitochondrial membrane 8 homolog A (yeast); Belongs to the small Tim family.
    
 
 0.625
gtf2b
General transcription factor IIB.
    
  0.602
pcf11
PCF11 cleavage and polyadenylation factor subunit.
     
 0.601
ENSPMEP00000015411
Collagen IV NC1 domain-containing protein.
     
 0.600
aifm1
Apoptosis inducing factor mitochondrion associated 1.
      
 0.597
LOC106934374
MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
      
 0.597
LOC106920859
Kelch-like family member 4.
      
 0.597
prps1
Phosphoribosyl pyrophosphate synthetase 1B.
      
 0.597
smpx
Small muscle protein X-linked.
   
  
 0.597
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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