STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106921965Uncharacterized protein. (996 aa)    
Predicted Functional Partners:
RELN
Reelin.
    
 0.867
pcsk9
Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family.
    
 0.848
ldlrap1
Low density lipoprotein receptor adaptor protein 1b.
    
 0.802
LOC106915467
Dickkopf WNT signaling pathway inhibitor 1a.
    
 0.787
LOC106926167
DAB adaptor protein 1a.
    
 0.755
dab1
DAB adaptor protein 1b.
    
 0.755
lrpap1
Low density lipoprotein receptor-related protein associated protein 1.
    
 0.734
mylip
Myosin regulatory light chain interacting protein a.
    
 0.719
dab2
DAB adaptor protein 2.
    
 0.704
LOC106924443
Low density lipoprotein receptor adaptor protein 1a.
    
 0.688
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.