Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
arhgef6Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6. (772 aa)    
Predicted Functional Partners:
git1
G protein-coupled receptor kinase interacting ArfGAP 1.
   
 0.989
LOC106928254
Uncharacterized protein.
   
 0.971
RAC2
Rac family small GTPase 2.
   
 0.971
LOC106925836
Uncharacterized protein.
   
 0.971
LOC106925837
Uncharacterized protein.
   
 0.971
LOC106925839
Uncharacterized protein.
   
 0.971
LOC106904798
Rac family small GTPase 3b.
   
 0.971
LOC106925835
Uncharacterized protein.
   
 0.971
PAK3
Non-specific serine/threonine protein kinase.
    
 0.966
pak1
Non-specific serine/threonine protein kinase.
    
 0.966
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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