STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000006576Uncharacterized protein. (1253 aa)    
Predicted Functional Partners:
LOC106911490
WD repeat domain 5.
    
  0.643
LOC106911367
WD repeat-containing protein 5.
    
  0.643
mcrs1
Microspherule protein 1.
    
  0.630
ENSPMEP00000012258
Uncharacterized protein.
    
  0.584
ENSPMEP00000028971
Uncharacterized protein.
    
  0.584
LOC106911431
Uncharacterized protein.
    
  0.542
ENSPMEP00000010585
BRCT domain-containing protein.
    
  0.542
zcchc2
CCHC-type domain-containing protein.
    
 
 0.539
YTHDC2
YTH domain containing 2.
   
  0.538
EIF4ENIF1
Eukaryotic translation initiation factor 4E nuclear import factor 1.
   
 0.537
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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