STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000006597Uncharacterized protein. (118 aa)    
Predicted Functional Partners:
RND1
Rho family GTPase 1.
   
 0.808
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.661
LOC106911536
Uncharacterized protein.
    
 0.661
crk
CRK proto-oncogene, adaptor protein.
    
 0.661
LOC106925801
Rho family GTPase 2.
   
  0.649
rnd2
Rho family GTPase 2.
   
  0.649
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.633
LOC106914967
Rho family GTPase 1b.
   
 0.628
LOC106916736
RAP1A, member of RAS oncogene family a.
   
  0.617
LOC106903419
Uncharacterized protein.
   
  0.617
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.