STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106928852Exostosin glycosyltransferase 1b; Belongs to the glycosyltransferase 47 family. (464 aa)    
Predicted Functional Partners:
ext2
Exostosin glycosyltransferase 2; Belongs to the glycosyltransferase 47 family.
    
0.955
extl2
Exostosin-like glycosyltransferase 2.
    
0.876
extl3
Exostosin-like glycosyltransferase 3; Belongs to the glycosyltransferase 47 family.
   
0.793
LOC106927483
Threonine aldolase 1.
     
 0.705
psat1
Phosphoserine aminotransferase.
     
 0.681
LOC106927638
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.660
LOC106933018
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.647
LOC106907087
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
   
 
 0.608
LOC106930278
Si:ch73-263o4.3.
     
 0.537
SDS
Serine dehydratase.
     
 0.537
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.