STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106916350WD repeat domain 20b. (624 aa)    
Predicted Functional Partners:
wdr48
WD repeat domain 48b.
    
 0.956
usp12
Ubiquitin specific peptidase 12a; Belongs to the peptidase C19 family.
   
 0.859
LOC106929253
Ubiquitin specific peptidase 12b; Belongs to the peptidase C19 family.
   
 0.859
LOC106906604
Ubiquitin carboxyl-terminal hydrolase.
   
 0.859
LOC106909970
Ubiquitin specific peptidase 12b; Belongs to the peptidase C19 family.
   
 0.859
LOC106910989
Uncharacterized protein.
   
 0.850
usp1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.787
ENSPMEP00000016496
Uncharacterized protein.
    
 0.787
usp38
Ubiquitin specific peptidase 38; Belongs to the peptidase C19 family.
    
 0.787
LOC106912581
Uncharacterized protein.
    
 0.787
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.