STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106920903Neurogenic differentiation factor. (358 aa)    
Predicted Functional Partners:
smarcc1
Uncharacterized protein.
    
 
 0.615
egr2
Early growth response 2b.
    
 
 0.614
thoc6
THO complex 6.
      
 0.596
cant1
Calcium activated nucleotidase 1a.
      
 0.595
LOC106915578
Hairy-related 12.
   
 0.572
ENSPMEP00000013137
Achaete-scute family bHLH transcription factor 1a.
   
 
 0.562
HES2
Hes family bHLH transcription factor 2, tandem duplicate 1.
   
 0.544
HES2-2
Hes family bHLH transcription factor 2, tandem duplicate 1.
   
 0.544
LOC106914207
Hairy-related 8.2.
   
 0.537
LOC106929872
Uncharacterized protein.
   
 0.532
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.