STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106903968Uncharacterized protein. (575 aa)    
Predicted Functional Partners:
cdhr2
Uncharacterized protein.
  
0.823
ENSPMEP00000030939
Uncharacterized protein.
   
0.801
cdh23
Cadherin-related 23.
   
0.801
ENSPMEP00000002051
Uncharacterized protein.
   
 0.662
LOC106931368
LHFPL tetraspan subfamily member 5b.
   
 0.662
lhfpl3
LHFPL tetraspan subfamily member 3.
   
 0.662
LOC106917395
LHFPL tetraspan subfamily member 5a.
   
 0.662
ENSPMEP00000017149
LHFPL tetraspan subfamily member 4a.
   
 0.662
fjx1
Four-jointed box kinase 1.
   
 0.651
ush1c
Usher syndrome 1C.
   
 
 0.638
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.