STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106930119Acylaminoacyl-peptide hydrolase. (749 aa)    
Predicted Functional Partners:
ist1
IST1 factor associated with ESCRT-III.
    
   0.684
LOC106923076
Uncharacterized protein.
   
 
 0.644
LOC106906400
Uncharacterized protein.
     
 0.613
prep
Prolyl endopeptidase.
   
 
0.609
sec11a
Signal peptidase complex catalytic subunit SEC11.
  
 
 0.594
grp
Uncharacterized protein.
  
 
 0.594
prcp
Prolylcarboxypeptidase (angiotensinase C).
     
 0.572
dpp7
Dipeptidyl-peptidase 7.
     
 0.572
NCSTN
Nicastrin.
   
  
 0.572
ENSPMEP00000016497
Trio Rho guanine nucleotide exchange factor a.
   
 
  0.555
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.