STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106903954Uncharacterized protein. (311 aa)    
Predicted Functional Partners:
tnfrsf13b
TACI-CRD2 domain-containing protein.
    
 0.625
LOC106907688
Interleukin-1.
    
 0.624
ENSPMEP00000007462
TIR domain-containing protein.
    
  0.520
cd59
CD59 molecule (CD59 blood group).
    
  0.520
LOC106911195
Uncharacterized protein.
    
  0.520
LOC106926663
Uncharacterized protein.
    
  0.520
LOC106926662
Zmp:0000000936.
    
  0.520
LOC106926662-2
Zmp:0000000936.
    
  0.520
LOC106926167
DAB adaptor protein 1a.
   
 0.502
LOC106907140
Uncharacterized protein.
   
 0.502
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.