STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106925655Immunoresponsive gene 1, like. (493 aa)    
Predicted Functional Partners:
acod1
Aconitate decarboxylase 1.
  
  
 
0.960
amt
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.893
sardh
Sarcosine dehydrogenase.
  
 0.891
dmgdh
Dimethylglycine dehydrogenase.
  
 0.891
pdpr
Pyruvate dehydrogenase phosphatase regulatory subunit.
  
 0.891
aifm1
Apoptosis inducing factor mitochondrion associated 1.
  
 0.840
aifm2
Apoptosis inducing factor mitochondria associated 2.
  
 0.840
LOC106910322
Apoptosis inducing factor mitochondria associated 5.
  
 0.840
sqor
Sulfide quinone oxidoreductase.
  
 0.840
aifm3
Apoptosis inducing factor mitochondria associated 3.
  
 0.840
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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