STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106933498Uncharacterized protein. (792 aa)    
Predicted Functional Partners:
ENSPMEP00000016872
Uncharacterized protein.
    
 0.842
ranbp2
RAN binding protein 2.
    
 0.665
ENSPMEP00000012258
Uncharacterized protein.
    
  0.589
ENSPMEP00000028971
Uncharacterized protein.
    
  0.589
ENSPMEP00000014077
Uncharacterized protein.
    
 0.577
LOC106916117
Uncharacterized protein.
    
  0.575
RIMS2
Regulating synaptic membrane exocytosis 2.
    
  0.575
rbbp5
Retinoblastoma binding protein 5.
    
 0.574
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.572
nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.556
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.