STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PABPN1LPoly(A) binding protein nuclear 1 like, cytoplasmic. (263 aa)    
Predicted Functional Partners:
cstf2
Cleavage stimulation factor, 3' pre-RNA, subunit 2.
  
0.957
eif4a3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.936
rbm8a
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
  
 0.924
sap18
Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins.
   
 0.920
papolg
Poly(A) polymerase gamma.
   
 0.908
pabpn1
Poly(A) binding protein, nuclear 1.
  
  
 
0.902
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
    
 0.896
acin1
SAP domain-containing protein.
   
 0.895
LOC106918835
Apoptotic chromatin condensation inducer 1b.
   
 0.895
pnn
Pinin, desmosome associated protein.
   
 0.882
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.