STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106929479Lysine methyltransferase 5Ab. (336 aa)    
Predicted Functional Partners:
plod3
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3.
    
  0.856
plod1
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a.
    
  0.833
plod2
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2.
    
  0.833
rbbp5
Retinoblastoma binding protein 5.
    
 0.791
camkmt
Calmodulin-lysine N-methyltransferase.
     
 0.775
LOC106911657
SET domain containing 7, histone lysine methyltransferase.
   
 0.772
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.763
kmt2e
Lysine (K)-specific methyltransferase 2E.
    
 0.750
tp53
Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.
   
 0.749
LOC106932420
Uncharacterized protein.
   
 0.748
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.