STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106934365Homeobox B4a. (253 aa)    
Predicted Functional Partners:
LOC106934363
Homeobox B3a.
   
  
0.899
LOC106934362
Homeobox domain-containing protein.
  
 
0.869
hoxb5
Homeobox B5b.
  
 
0.867
hoxd4
Homeobox D4a.
  
  
0.792
hoxc4
Homeobox C4a.
  
  
0.767
hoxc6
Homeobox C6a.
   
  
0.762
HOXA7
Homeobox A7.
   
  
0.762
hoxc5
Homeobox C5a.
   
  
0.755
LOC106934364
Homeobox domain-containing protein.
   
  
0.744
HOXB6
Homeobox B6.
   
  
0.744
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.