STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106931505SH3-domain binding protein 5a (BTK-associated). (452 aa)    
Predicted Functional Partners:
LOC106904672
RAB11a, member RAS oncogene family, like.
    
 
 0.638
LOC106917762
RAB11B, member RAS oncogene family, b.
    
 
 0.638
LOC106917763
RAB11B, member RAS oncogene family, a.
    
 
 0.638
LOC106909692
RAB11a, member RAS oncogene family.
    
 
 0.638
LOC106920194
Uncharacterized protein.
    
 
 0.638
rab25
RAB25, member RAS oncogene family b.
    
 
 0.574
rabl2b
RAB, member of RAS oncogene family-like 2.
    
 
 0.574
LOC106927014
RAB25, member RAS oncogene family a.
    
 
 0.574
ercc2
Excision repair cross-complementation group 2.
   
 
  0.525
dhps
Deoxyhypusine synthase.
      
 0.495
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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