STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000007817Uncharacterized protein. (478 aa)    
Predicted Functional Partners:
ENSPMEP00000012258
Uncharacterized protein.
    
  0.584
ENSPMEP00000028971
Uncharacterized protein.
    
  0.584
LOC106911431
Uncharacterized protein.
    
  0.542
ENSPMEP00000010585
BRCT domain-containing protein.
    
  0.542
YTHDC2
YTH domain containing 2.
    
  0.524
WDR33
WD repeat domain 33.
    
 0.506
ENSPMEP00000014332
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
  0.503
sgk3
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.475
LOC106929669
Uncharacterized protein.
   
  0.466
ENSPMEP00000015565
NDK domain-containing protein.
    
 0.466
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.