STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc32Coiled-coil domain containing 32. (190 aa)    
Predicted Functional Partners:
mrpl32
Mitochondrial ribosomal protein L32.
   
 
 0.915
mrpl41
Mitochondrial ribosomal protein L41.
   
 
 0.908
mrpl20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.902
chchd1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
   
 
 0.901
mrpl40
Mitochondrial ribosomal protein L40.
   
   0.897
ENSPMEP00000015019
Mitochondrial ribosomal protein S33.
   
 
 0.897
mrpl52
Mitochondrial ribosomal protein L52.
   
 
 0.894
mrpl30
Mitochondrial ribosomal protein L30.
   
   0.883
dap3
Death associated protein 3.
   
 
 0.881
mrpl51
Mitochondrial ribosomal protein L51.
   
 
 0.875
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.