STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aspscr1ASPSCR1 tether for SLC2A4, UBX domain containing. (591 aa)    
Predicted Functional Partners:
ubxn7
UBX domain protein 7.
    
 
 0.998
faf1
Fas (TNFRSF6) associated factor 1.
    
 0.990
ubxn2a
UBX domain protein 2A.
    
 0.987
nsfl1c
NSFL1 (p97) cofactor (p47).
    
 0.982
ubxn6
UBX domain protein 6.
   
 
0.975
UBXN4
UBX domain protein 4.
    
 0.969
LOC106922052
Zgc:136908; Belongs to the AAA ATPase family.
    
 0.960
vcp
Valosin containing protein; Belongs to the AAA ATPase family.
    
 0.960
SPATA5
Spermatogenesis associated 5; Belongs to the AAA ATPase family.
    
 0.942
spata5l1
Spermatogenesis associated 5-like 1.
    
 0.942
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.