STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000012653Uncharacterized protein. (309 aa)    
Predicted Functional Partners:
LOC106932839
Uncharacterized protein.
 
  
   0.820
ENSPMEP00000028589
DH domain-containing protein.
 
  
   0.813
LOC106925155
Rho guanine nucleotide exchange factor (GEF) 25b.
 
   
  0.805
ENSPMEP00000023367
Uncharacterized protein.
 
  
   0.797
LOC106910314
Uncharacterized protein.
 
   
  0.688
ENSPMEP00000028671
Protein kinase domain-containing protein.
 
  
   0.657
ENSPMEP00000031889
Protein kinase domain-containing protein.
 
  
   0.637
LOC106928254
Uncharacterized protein.
    
  0.422
LOC106933042
Cell division cycle 42.
    
  0.422
LOC106925801
Rho family GTPase 2.
    
  0.422
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.